I'm glad to hear it is all working properly now, but your post begs the question - why did you need to copy the files at all?
Adagio expects there to be only a single \SOFTRAK\ Folder which contains all the Adagio modules in their own Folders referencing the database manager in the SYSTEM Folder and the data dictionary files in the DICT Folder, both of which should be at the same "level" as the module Folder.
Any other installation risks corrupting your data, and you should move to that module as soon as possible.
Why is you server setup any other way?
There is a two hour presentation at the
Adagio Opportunity Conference on how the Adagio modules should be set up and what Adagio expects to find in the various Folders it references.