Hello Steven,
1. Yes, QR 65A will convert reports designed using QR 61F.
2. The instructions for conversion are on the release notes and in Chapter 11 of the QR Manual. If you are only changing the QR version, you should back up your data. Print out your report definitions and link lists. QR may reset your links during conversion.
3. Yes, QR 65A and QRW 62B can report on the programs you have listed.