You can import orders using Adagio's Import Templates. You can also import Quotes into SalesCQ if you want to inspect the orders before they end up in OrderEntry. If the goods have been sold off the web site and payment collected, then you can import invoices into Adagio Invoices. All these imports are template driven from Excel or CSV files. Your web site software should be able to generate something useful for Adagio.
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Andrew Bates